My GitHub: teazrq
Reinforcement Learning Trees (RLT)
- CRAN: link
- GitHub (version > 4.0): link
- On CRAN Task View: Machine Learning and Statistical Learning
- You can find this example file, which further explains the functions.
- The survival analysis component is already implemented. However, some features are still under experiment.
Orthogonality Constrained Optimization and Dimension Reduction (orthoDr)
- CRAN: link
- GitHub: link
- Examples: link
- This package offers an optimization solver for orthogonality constrained problems: \(\min f(X)\) s.t. \(X^T X = I\) by utilizing the algorithm developed by Wen and Yin (2013). We utilize this to solve a variety of semiparametric dimension reduction and personalized medicine problems.
Dimension Reduction Forests (drforest)
- GitHub: link
- This package provides the statistical estimation methods for dimension reduction forests and local subspace variable importance.
- Local subspace variable importance can be used for detecting influential variables in a personalized prediction/recommendation.
Random Forests for Heterogeneous Treatment Effect Estimation with Multiple Responses (MOTE.RF)
- GitHub: link
- Designed for a setting in which the covariates \(X\) and multivariate response \(Y\) are both measured before and after the intervention.
- Applied to a microbiome study to estimate the dietary effect on multiple health outcomes.
A Nonnegative Matrix Factorization Tool Box (MatrixFact)
- GitHub: link
- This package implements a variety of matrix factorization tools, such as NMF, ONMF, semi-NMF, semi-orthogonal NMF, and some of their extensions to binary data.
- Our method semi-orthogonal NMF can be applied to a document-word matrix to extract meaningful information for analyzing text data.
Recursively Imputed Survival Trees (RIST)
- Example: files/RIST/RISTexample.r
- Main function: files/RIST/RIST.r
- Supporting functions: files/RIST/RISTfunctions.r
- R Package: will be integrated with RLT (still working on it…)